منابع مشابه
WoLF PSORT: protein localization predictor
WoLF PSORT is an extension of the PSORT II program for protein subcellular location prediction. WoLF PSORT converts protein amino acid sequences into numerical localization features; based on sorting signals, amino acid composition and functional motifs such as DNA-binding motifs. After conversion, a simple k-nearest neighbor classifier is used for prediction. Using html, the evidence for each ...
متن کاملProtein Subcellular Localisation Prediction with WoLF PSORT
We present a new program for predicting protein subcellular localization from amino acid sequence. WoLF PSORT is a major update to the PSORTII program, based on new sequence data and incorporating new features with a feature selection procedure. Following SWISS-PROT, we divided eukaryotes into three groups: fungi, plant, and animal. For the 2113 fungi proteins divided into 14 categories; we fou...
متن کاملPSORT-B: improving protein subcellular localization prediction for Gram-negative bacteria
Automated prediction of bacterial protein subcellular localization is an important tool for genome annotation and drug discovery. PSORT has been one of the most widely used computational methods for such bacterial protein analysis; however, it has not been updated since it was introduced in 1991. In addition, neither PSORT nor any of the other computational methods available make predictions fo...
متن کاملWomen's Health Initiative.
WoLF PSORT is an extension of the PSORT II program for protein subcellular location prediction. WoLF PSORT converts protein amino acid sequences into numerical localization features; based on sorting signals, amino acid composition and functional motifs such as DNA-binding motifs. After conversion, a simple k-nearest neighbor classifier is used for prediction. Using html, the evidence for each ...
متن کاملpsort 2009
This memo reports the results of our psort (general purpose) sorting software on a 5 disk 427.86$ PC with 4 GB of RAM and an Athlon LE 1640 2.6 GHz processor. psort sorted 67 · 2 records in 2211 seconds, for a Daytona sort size slightly larger than 224.8 GB. A version of psort hand-optimized for the Pennysort benchmark sorted 74 ·2 records in the same time and on the same hardware, for an Indy ...
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ژورنال
عنوان ژورنال: Nucleic Acids Research
سال: 2007
ISSN: 0305-1048,1362-4962
DOI: 10.1093/nar/gkm259